rs6811599 chr4:113859102 T>C
- Sequence
ctgcacagaaactttttagtatga[T/C]gtaatcccatttgtctatttttgc
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- ATF7_HUMAN ATF2_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF7_HUMAN | 1.33 | 2.16 | 1.33 | n/a | n/a | |||
| ATF2_HUMAN | -0.29 | 1.19 | 1.56 | 0.01 | Weak Concordant | |||
| CREB1_HUMAN | n/a | 1.51 | 1.33 | 4.35 | Concordant |
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Motif analysis
