rs6814443 chr4:48126833 T>G
- Sequence
agaactttgaaagagaaattgctg[T/G]tatcagtcagcaggcaggagtatc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MTA2_HUMAN NFIC_HUMAN NCOR1_HUMAN HTF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | 3.69 | n/a | 2.00 | n/a | n/a | |||
| NFIC_HUMAN | 3.05 | n/a | 2.00 | n/a | No Hit | |||
| NCOR1_HUMAN | 3.51 | n/a | 2.00 | n/a | n/a | |||
| HTF4_HUMAN | 2.70 | n/a | 2.00 | n/a | No Hit | |||
| SMCE1_HUMAN | 3.57 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Liver, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood