rs6815287 chr4:91965360 T>C
- Sequence
tcccattcagttcaccagtctgtc[T/C]cctacaggttggagatggaatata
- ASB in cell types
- LNCaP (prostate carcinoma) neural progenitors HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.93 | 2.53 | 1.29 | 2.70 | Concordant |
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Motif analysis
