rs68166856 chr22:36222031 A>C
- Sequence
gctgggacctgaagcaggacctac[A/C]cttcaaacaaacatctggctttga
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- SCRT2_HUMAN ZN654_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SCRT2_HUMAN | -3.91 | 2.53 | 2.00 | n/a | n/a | |||
| ZN654_HUMAN | n/a | 2.47 | 2.50 | n/a | n/a | |||
| CTCF_HUMAN | 0.22 | 0.90 | 1.38 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Thyroid