rs6820248 chr4:184364446 G>A
- Sequence
aaacattacactgtggtctcagcc[G/A]tgctgtgaggaattagtgaaagcc
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells) liver
- ASB for transcription factors
- RARA_HUMAN SMAD4_HUMAN RXRA_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | 2.90 | n/a | 1.50 | n/a | No Hit | |||
| SMAD4_HUMAN | 2.78 | -3.45 | 1.33 | n/a | No Hit | |||
| RXRA_HUMAN | 2.57 | n/a | 1.33 | n/a | No Hit | |||
| CEBPA_HUMAN | 2.64 | -3.17 | 1.50 | n/a | No Hit | |||
| HM20A_HUMAN | 2.41 | n/a | 1.33 | n/a | n/a |
Items per page:
1 – 5 of 15