rs6822582 chr4:176065857 T>G
- Sequence
ggcctctggggcagaccctggaga[T/G]cgggctcgcggcgccttccatcgt
- ASB in cell types
- GM12878 (female B-cells) cranial neural crest cells thymus-derived CD34- cells
- ASB for transcription factors
- AP2A_HUMAN BHE40_HUMAN BC11B_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AP2A_HUMAN | -3.72 | 2.49 | 2.00 | n/a | No Hit | |||
| BHE40_HUMAN | -1.45 | 0.62 | 1.33 | n/a | No Hit | |||
| BC11B_HUMAN | n/a | 2.00 | 2.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Thyroid