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rs682736 chr1:69382365 T>A

Sequence
gaaggtgagagacacgtctcacac[T/A]gtggcagacaagagaagagagctt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN SKIL_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 2.14 -1.89 4.1·10-51.00 1.33 n/a No Hit
SKIL_HUMAN 1.47 -1.74 0.031.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol rheumatoid arthritis
GTEx eQTL Muscle_Skeletal Nerve_Tibial

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