rs683278 chr18:9643751 G>A
- Sequence
gcagttgaatgactttctgctgac[G/A]tgctccttctggttgctagggtac
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 1.19 | -0.63 | 1.42 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, mitral annular calcium, refractive error, sporadic creutzfeldt-jakob disease, triglycerides, waist hip ratio
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic