rs684088 chr7:153087829 T>A
- Sequence
gggggagattttgggggtctgcgc[T/A]tagagggtcagtgcaggtttggag
- ASB in cell types
- K562 (myelogenous leukemia) HEK293T (embryonic kidney)
- ASB for transcription factors
- NFIC_HUMAN PRDM9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | n/a | 0.65 | 1.50 | n/a | No Hit | |||
| PRDM9_HUMAN | -3.36 | 1.89 | 2.50 | n/a | n/a |
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