rs6846180 chr4:163053364 A>G
- Sequence
gtatcatgaacgttctgtactgcc[A/G]tttttaatgtaagcctcactcaag
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.27 | 1.37 | 1.71 | -0.57 | Weak Discordant | |||
| FOXA1_HUMAN | -1.17 | 1.65 | 2.00 | n/a | No Hit |
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Motif analysis
