rs6850 chr7:44796715 A>G
- Sequence
cgccaccgccgaggaaaaccgtgt[A/G]ctattagccatggtcaaccccacc
- ASB in cell types
- HEK293 (embryonic kidney) thymus-derived CD34- cells
- ASB for transcription factors
- BC11B_HUMAN PRD10_HUMAN TYY1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BC11B_HUMAN | n/a | 2.11 | 2.00 | n/a | n/a | |||
| PRD10_HUMAN | 1.89 | n/a | 1.33 | n/a | n/a | |||
| TYY1_HUMAN | 1.52 | -1.78 | 1.33 | n/a | No Hit | |||
| CTCF_HUMAN | 0.31 | 0.54 | 1.26 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood