rs6854167 chr4:4248157 G>T
- Sequence
gctgggcctcggcgtccggcagga[G/T]gaggaatcgccgccggagctgctg
- ASB in cell types
- K562 (myelogenous leukemia) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ETV1_HUMAN CREB1_HUMAN ZN316_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ETV1_HUMAN | n/a | 2.59 | 2.00 | 2.99 | Concordant | |||
| CREB1_HUMAN | -0.01 | 1.05 | 1.47 | n/a | No Hit | |||
| ZN316_HUMAN | -1.36 | 1.73 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -0.46 | 1.69 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | -1.01 | 1.47 | 2.00 | n/a | n/a |
Items per page:
1 – 5 of 8
Motif analysis
