rs6857026 chr4:79852307 C>T
- Sequence
ggatttctagaccctctatagaat[C/T]cttggggattttttcagccatccc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.41 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), amyotrophic lateral sclerosis (als), aortic valve calcium, birth weight, hypertension (early onset hypertension), lumbar spine bone mineral density (bmd) (females), mitral annular calcium, neuroblastoma (brain cancer)