ADASTRA v1.6.10
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rs6869628
chr5:149628439
A
>
G
Sequence
ggagaaaggcagtctccgcctcct[A/G]ggaaaggcagtcctggggagagga
ASB in cell types
periferal blood macrophages
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
n/a
2.69
1.00
1.4·10
-4
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
chronic kidney disease
,
parkinsons disease
GTEx eQTL
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Pituitary
,
Prostate
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)