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rs687339 chr3:136213517 C>T

Sequence
gtgcaaatatttagacatatggta[C/T]gtaggtcaccatttgtacttatgc
ASB in cell types
liver
ASB for transcription factors
HNF4A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN 2.36 -2.61 9.8·10-51.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI c-reactive protein levels triglyceride levels
GRASP asthma birth weight coronary artery disease (cad) hdl cholesterol ldl cholesterol plasma fibrinogen triglycerides
Finemapping triglycerides
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Nucleus_accumbens_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Lung Muscle_Skeletal Nerve_Tibial Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Stomach Testis Thyroid

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