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rs6879915 chr5:7794730 C>A

Sequence
tcggaccctgctgccctaaagtag[C/A]ctcctcactggacagaagaatcta
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
MEF2B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN 1.32 -1.59 0.021.00 1.33 -0.07 Weak Concordant
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Motif analysis

MEF2B_HUMAN Weak Concordant
MEF2B_HUMAN pic

Genetic associations

GRASP adiponectin levels college completion ldl cholesterol transmission distortion years of education
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia

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