rs688456 chr11:116851835 G>T
- Sequence
ccaaaaaccactggcaggaagtgg[G/T]gcaacatggttgtgtgggagtgag
- ASB in cell types
- SKH1 (chronic myelogenous leukemia, BCR-ABL1 positive)
- ASB for transcription factors
- CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPA_HUMAN | -0.62 | 1.03 | 1.50 | 2.83 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Colon_Transverse, Esophagus_Mucosa, Heart_Left_Ventricle, Nerve_Tibial, Testis