rs688728 chr6:157756867 G>A
- Sequence
ctgggcatctcagcaacaaagcag[G/A]ctgtgccaacctgcggccgagggc
- ASB in cell types
- GM12878 (female B-cells) foreskin keratinocyte RH4 (alveolar rhabdomyosarcoma) neural progenitors
- ASB for transcription factors
- CTCF_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.24 | 1.08 | 1.55 | n/a | No Hit | |||
| FOXK2_HUMAN | -2.87 | 2.16 | 1.50 | n/a | n/a |
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