rs6890690 chr5:115930298 C>T
- Sequence
tcaggtaatcggaatgacttacgg[C/T]ggagccggtaattggaatgaatca
- ASB in cell types
- HCT-116 (colon carcinoma) K562 (myelogenous leukemia) HCT-116-RAD21-mAC MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOS_HUMAN NIPBL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOS_HUMAN | 2.56 | n/a | 3.00 | n/a | n/a | |||
| NIPBL_HUMAN | -0.23 | 1.12 | 1.00 | n/a | n/a |
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