rs689211 chr10:68047843 C>A
- Sequence
tggcagattcttacaaaagtaaat[C/A]tactcttaccatatgacccaattc
- ASB in cell types
- LNCaP (prostate carcinoma) breast tumor tissue LNCaP C4-2 (prostate carcinoma) LHSAR (prostate epithelial cells)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.03 | 1.99 | 1.58 | 6.68 | Concordant | |||
| ANDR_HUMAN | -0.78 | 1.67 | 1.39 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adrenal_Gland, Colon_Transverse, Esophagus_Mucosa, Lung, Muscle_Skeletal, Pancreas, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood