rs689384 chr18:56651223 T>C
- Sequence
gcccacagctggccttttctccac[T/C]ttcggtctccatcgtaacgcggct
- ASB in cell types
- breast tumor tissue K562 (myelogenous leukemia) GM12878 (female B-cells) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- ESR1_HUMAN ZN143_HUMAN TYY1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.54 | n/a | 2.50 | n/a | No Hit | |||
| ZN143_HUMAN | 0.82 | -0.77 | 1.17 | n/a | No Hit | |||
| TYY1_HUMAN | 1.48 | 0.45 | 1.37 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Thyroid