rs6896694 chr5:173969655 C>T
- Sequence
ggaggaaacaaacattctcttgct[C/T]gcctgtgtcctcaggacccatcat
- ASB in cell types
- A549 (lung carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- GCR_HUMAN JUN_HUMAN CEBPB_HUMAN EP300_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.09 | 1.98 | 2.14 | n/a | No Hit | |||
| JUN_HUMAN | -0.51 | 1.48 | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | -0.34 | 1.33 | 1.98 | n/a | No Hit | |||
| EP300_HUMAN | -0.13 | 1.64 | 2.12 | n/a | n/a |
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