rs6902334 chr6:87731945 T>C
- Sequence
tagagagaggtgagcagccaatgt[T/C]acagtaggaacaatacttcctgta
- ASB in cell types
- CD14+ monocytes breast tumor tissue A549 (lung carcinoma) KG1 (acute myeloid leukemia)
- ASB for transcription factors
- STAT1_HUMAN ESR1_HUMAN ZBT16_HUMAN FLI1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | n/a | 3.16 | 2.50 | n/a | No Hit | |||
| ESR1_HUMAN | n/a | 2.65 | 2.50 | n/a | No Hit | |||
| ZBT16_HUMAN | 2.01 | n/a | 1.50 | n/a | n/a | |||
| FLI1_HUMAN | 1.86 | -1.65 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP autism with low iq, fasting blood glucose, hdl cholesterol, obesity with early age of onset (age >2), waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Breast_Mammary_Tissue, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood