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rs691342 chr17:78433081 C>G

Sequence
tgcccggaccttgctctctctgag[C/G]cagggtccatgtcgctattgattt
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
CREB1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CREB1_HUMAN -0.60 1.92 1.001.1·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Nucleus_accumbens_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Pancreas Pituitary Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Testis Thyroid Whole_Blood

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