Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs6918485 chr6:15037021 C>T

Sequence
cattctcccccacagcagcggaat[C/T]ttccagagcctccttaaccagcct
ASB in cell types
K562 (myelogenous leukemia) liver
ASB for transcription factors
REQU_HUMAN RXRA_HUMAN EGR1_HUMAN HNF4A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REQU_HUMAN 2.67 n/a 2.4·10-31.00 3.00 n/a n/a
RXRA_HUMAN -1.84 2.12 1.005.0·10-3 1.33 n/a No Hit
EGR1_HUMAN 1.83 n/a 7.5·10-31.00 2.75 n/a No Hit
HNF4A_HUMAN -1.75 1.81 1.000.02 1.33 n/a No Hit
RAD21_HUMAN n/a 1.59 1.000.03 1.33 n/a n/a
Items per page:
1 – 5 of 7

Motif analysis

No data available

Genetic associations

GRASP bipolar disorder and schizophrenia parkinsons disease triglycerides

Download