rs692343 chr19:39073846 C>T
- Sequence
aatttgaagcagggtggcatctct[C/T]gggaggtgagctgtgccctgggca
- ASB in cell types
- HEK293 (embryonic kidney) A549 (lung carcinoma) HepG2 (hepatoblastoma) HAEC (human aortic endothelial cells)
- ASB for transcription factors
- ETV5_HUMAN ZBT21_HUMAN SP2_HUMAN JUN_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ETV5_HUMAN | 2.09 | n/a | 1.00 | n/a | No Hit | |||
| ZBT21_HUMAN | 0.89 | n/a | 6.00 | n/a | n/a | |||
| SP2_HUMAN | 3.57 | n/a | 4.00 | n/a | No Hit | |||
| JUN_HUMAN | 1.62 | -0.10 | 1.76 | n/a | No Hit | |||
| ZBT26_HUMAN | 2.41 | n/a | 2.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg