rs6934771 chr6:28924079 C>T
- Sequence
tgacaaggtttcgtggcctggggg[C/T]ctgagctgtttcctcttggaaagg
- ASB in cell types
- VCaP (prostate carcinoma) Jurkat (T-cells)
- ASB for transcription factors
- GABPA_HUMAN ERG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 1.90 | -1.30 | 2.25 | n/a | No Hit | |||
| ERG_HUMAN | 2.03 | -1.38 | 3.00 | n/a | No Hit |
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