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rs6947612 chr7:117992921 A>G

Sequence
acttgcacctctaattcaaaggtg[A/G]caaagtggagaggctatttattag
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
TBX21_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX21_HUMAN 2.49 n/a 6.3·10-51.00 1.33 n/a No Hit
IKZF2_HUMAN 2.17 -2.21 2.3·10-31.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI glaucoma (primary open-angle)
GRASP advanced age-related macular degeneration (geographic atrophy) aortic valve calcium
GTEx eQTL Cells_Cultured_fibroblasts Muscle_Skeletal Ovary Skin_Sun_Exposed_Lower_leg

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