rs6957876 chr7:18000641 C>T
- Sequence
aatctaaattccacagaacctgaa[C/T]tttagtgtcatcaccatatccatt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MGAP_HUMAN LMBL2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MGAP_HUMAN | n/a | 2.87 | 2.00 | n/a | n/a | |||
| LMBL2_HUMAN | n/a | 2.31 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, alzheimers disease, biploar disorder (bipolar schizoaffective disorder), bipolar disorder, hdl cholesterol, major depressive disorder, paternal transmission distortion, total cholesterol, transmission distortion
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Prostate, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid