rs6960438 chr7:55074215 C>T
- Sequence
acccttcctgctcactctgagtca[C/T]ggtgaaaatgtttcaggatctcgg
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- JUN_HUMAN GCR_HUMAN EP300_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.18 | -0.13 | 2.06 | 0.29 | Weak Discordant | |||
| GCR_HUMAN | 1.33 | -0.24 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 1.28 | -0.18 | 2.00 | n/a | n/a |
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Motif analysis
