rs6968631 chr7:27663057 A>G
- Sequence
ggtccgcagctgtgcgaaggacca[A/G]taagaggcctttttgaacagtgac
- ASB in cell types
- K562 (myelogenous leukemia) CD14+ monocytes breast tumor tissue
- ASB for transcription factors
- STAT1_HUMAN ESR1_HUMAN ATF3_HUMAN CTBP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.48 | n/a | 2.50 | n/a | No Hit | |||
| ESR1_HUMAN | 1.35 | n/a | 2.50 | n/a | No Hit | |||
| ATF3_HUMAN | -1.04 | 1.68 | 2.00 | n/a | No Hit | |||
| CTBP1_HUMAN | n/a | 2.39 | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | n/a | 1.76 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid