rs6969043 chr7:27663051 G>A
- Sequence
ttcccaggtccgcagctgtgcgaa[G/A]gaccaataagaggcctttttgaac
- ASB in cell types
- K562 (myelogenous leukemia) monocyte-derived macrophages breast tumor tissue CD14+ monocytes
- ASB for transcription factors
- TF65_HUMAN ESR1_HUMAN STAT1_HUMAN ATF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.45 | n/a | 2.50 | n/a | No Hit | |||
| ESR1_HUMAN | 1.31 | n/a | 2.50 | n/a | No Hit | |||
| STAT1_HUMAN | 1.02 | -3.51 | 2.50 | n/a | No Hit | |||
| ATF3_HUMAN | -1.06 | 1.67 | 2.00 | n/a | No Hit | |||
| IKZF1_HUMAN | n/a | 1.81 | 2.00 | n/a | No Hit |
Items per page:
1 – 5 of 6
Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid