rs6979746 chr7:47791937 T>C
- Sequence
tgtacctggcacatggtgtgtcta[T/C]tggtgttgatttttctatagtttg
- ASB in cell types
- LNCaP (prostate carcinoma) A549 (lung carcinoma) MDA-MB-453 (breast adenocarcinoma)
- ASB for transcription factors
- ANDR_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.69 | 0.69 | 1.60 | -1.45 | Weak Concordant | |||
| GCR_HUMAN | 1.27 | 0.17 | 1.92 | n/a | No Hit |
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Motif analysis
