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rs698707 chr19:47515603 A>G

Sequence
ttgctccctctgtcggccagtact[A/G]gaactgctttggggagaccggtga
ASB in cell types
GM12878 (female B-cells) HepG2 (hepatoblastoma)
ASB for transcription factors
CTCF_HUMAN FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.23 1.00 1.008.6·10-6 1.44 n/a No Hit
FOXK2_HUMAN -2.52 2.26 1.009.5·10-4 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose ldl cholesterol refractive error total cholesterol
GTEx eQTL Brain_Cerebellum Skin_Sun_Exposed_Lower_leg

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