ADASTRA v1.6.10
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rs699032
chr12:24998193
T
>
C
Sequence
tgtgtcactctgctattttaggaa[T/C]tgttccaataagagatgtttatag
ASB in cell types
SK-N-SH (neuroblastoma)
germinal center B-cells
ASB for transcription factors
BCL6_HUMAN
EP300_HUMAN
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View in UCSC Genome Browser
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BCL6_HUMAN
2.28
n/a
6.1·10
-3
1.00
2.50
n/a
No Hit
EP300_HUMAN
-1.97
1.89
1.00
0.01
1.33
n/a
n/a
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5
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Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
alzheimers disease
,
chronic kidney disease
,
ldl cholesterol
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)