rs6993367 chr8:51958317 A>G
- Sequence
ttagacggtaccttttattgaagc[A/G]acagtgtacagcagtagcagaggg
- ASB in cell types
- pancreas
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.67 | -1.56 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP college completion, diastolic blood pressure (dbp), ldl cholesterol, maternal transmission distortion, microalbuminuria, systolic blood pressure (sbp), total cholesterol, waist hip ratio, years of education
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood