rs700004 chr6:44064594 C>A
- Sequence
aagggatctggctgggaggacagg[C/A]gaaatggacatagacgtcagagaa
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) GM12878 (female B-cells) CD14+ monocytes
- ASB for transcription factors
- AFF1_HUMAN SMCA5_HUMAN TIF1A_HUMAN MNT_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AFF1_HUMAN | 2.31 | n/a | 3.00 | n/a | n/a | |||
| SMCA5_HUMAN | 3.30 | n/a | 3.00 | n/a | No Hit | |||
| TIF1A_HUMAN | 2.52 | n/a | 3.00 | n/a | n/a | |||
| MNT_HUMAN | 2.62 | 0.97 | 2.75 | n/a | n/a | |||
| FOXK2_HUMAN | 2.40 | 1.93 | 2.44 | n/a | n/a |
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