rs7019575 chr9:6243935 G>C
- Sequence
agggaaagcactaatttgactgtg[G/C]tttctgaacaaccaggaaatcaca
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN ELF1_HUMAN RUNX3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.90 | -1.43 | 1.33 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.97 | -2.21 | 1.33 | n/a | n/a | |||
| ELF1_HUMAN | 1.87 | -2.11 | 1.33 | n/a | No Hit | |||
| RUNX3_HUMAN | 1.97 | -1.62 | 1.50 | -5.54 | Concordant | |||
| MTA2_HUMAN | 1.90 | -2.14 | 1.33 | n/a | n/a |
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Motif analysis
