rs701999 chr3:120819950 C>A
- Sequence
tctctttgcagctaagattaagtt[C/A]tagctaatgtgacataagcagaaa
- ASB in cell types
- induced pluripotent stem cells
- ASB for transcription factors
- DUX4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| DUX4_HUMAN | -1.49 | 1.72 | 1.00 | 3.40 | Concordant |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), fasting insulin, homa-ir, parkinsons disease, rheumatoid arthritis