ADASTRA v1.6.10
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adastra.autosome.org
rs702490
chr1:53729345
A
>
G
Sequence
aacgagaagccctagcacagagat[A/G]ttctcacaaagagcgctccgtaag
ASB in cell types
LNCaP C4-2B (prostate carcinoma)
ASB for transcription factors
ZFX_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZFX_HUMAN
1.13
-0.46
8.9·10
-3
1.00
1.31
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
EMBL-EBI
male-pattern baldness
,
monobrow
GRASP
diabetic retinopathy in type 2 diabetes mellitus
,
mitral annular calcium
,
total cholesterol change with statins
GTEx eQTL
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)