rs704347 chr4:2468886 A>G
- Sequence
ccctcagaccgtgactcccgaaaa[A/G]ccttgcgggcggggcgcgcccgcg
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ZN143_HUMAN ESR1_HUMAN E2F1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN143_HUMAN | n/a | 2.68 | 2.00 | 1.92 | Weak Concordant | |||
| ESR1_HUMAN | -0.38 | 1.41 | 2.05 | n/a | No Hit | |||
| E2F1_HUMAN | 1.79 | -1.21 | 1.83 | n/a | No Hit |
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Motif analysis
