rs705197 chr1:34379235 G>A
- Sequence
gggcacataatcaggcactccaga[G/A]aagaaaaatggccacgattaccag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF3_HUMAN KDM1A_HUMAN TAL1_HUMAN NCOR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | -1.19 | 0.74 | 1.33 | n/a | No Hit | |||
| KDM1A_HUMAN | -1.13 | 1.40 | 1.33 | n/a | n/a | |||
| TAL1_HUMAN | 0.15 | 1.32 | 1.47 | n/a | No Hit | |||
| NCOR1_HUMAN | -0.17 | 1.23 | 1.33 | n/a | n/a | |||
| REQU_HUMAN | -0.96 | 1.31 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP abnormal involuntary movement scale, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, college completion, fasting insulin, homa-b, homa-ir, severe diabetic retinopathy