ADASTRA v1.6.10
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rs706931
chr6:110815399
T
>
C
Sequence
caggcacccccagtcccgcctccc[T/C]ccttcatttccttgttttggaacc
ASB in cell types
fetal bone marrow-derived mononuclear cells
thymus-derived CD34- cells
breast tumor tissue
ASB for transcription factors
KMT2A_HUMAN
ESR1_HUMAN
BC11B_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KMT2A_HUMAN
-3.39
2.54
1.00
3.7·10
-4
1.50
n/a
n/a
ESR1_HUMAN
n/a
2.55
1.00
5.6·10
-3
2.50
n/a
No Hit
BC11B_HUMAN
2.09
-0.19
0.02
1.00
2.00
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Adrenal_Gland
,
Artery_Tibial
,
Brain_Cerebellum
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2-scale
log2(Alt/Ref motif p-value)