rs706932 chr6:110815595 C>G
- Sequence
ctcgggccaccacagcctcgcccc[C/G]acaaagcatgcgcgcctgcgtacc
- ASB in cell types
- CD14+ monocytes monocyte-derived macrophages thymus-derived CD34- cells breast tumor tissue
- ASB for transcription factors
- STAT1_HUMAN TF65_HUMAN BC11B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.57 | n/a | 2.50 | n/a | No Hit | |||
| TF65_HUMAN | 1.49 | 0.40 | 2.17 | n/a | No Hit | |||
| BC11B_HUMAN | 1.91 | -0.35 | 2.00 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Stomach, Testis, Thyroid