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rs707236 chr16:83769555 T>A

Sequence
atgtttataaggttaaaggggaag[T/A]gagcaagggcaggaagtccccctg
ASB in cell types
monocyte-derived dendritic cells CD34+ hematopoietic stem progenitor cells
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.77 -3.39 5.2·10-71.00 1.75 -3.04 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP college completion lp-pla2 activity parkinsons disease rheumatoid arthritis, combined control dataset, gender differentiated
GTEx eQTL Adipose_Visceral_Omentum Brain_Nucleus_accumbens_basal_ganglia Nerve_Tibial Whole_Blood

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