rs707710 chr17:75588194 A>C
- Sequence
gccgttccgaccgcgggcaggcgg[A/C]cagggcgaaaccggcggccgagcc
- ASB in cell types
- GM12878 (female B-cells) upper lobe of left lung
- ASB for transcription factors
- IKZF1_HUMAN REQU_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.90 | -1.54 | 1.33 | n/a | No Hit | |||
| REQU_HUMAN | 1.83 | n/a | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood