rs7082278 chr10:126460372 C>T
- Sequence
agcaaaggctcactgggcatgctg[C/T]catgactgaaactttcctctgccc
- ASB in cell types
- A549 (lung carcinoma) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- GCR_HUMAN JUN_HUMAN EP300_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 2.07 | -1.45 | 2.17 | 3.20 | Discordant | |||
| JUN_HUMAN | 1.66 | -1.34 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 1.62 | -1.47 | 3.00 | n/a | n/a |
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Motif analysis
