rs708574 chr3:9731630 G>A
- Sequence
agagctagagaagccctgtggggt[G/A]tccagggtcctttctgaatcccgg
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney) A549 (lung carcinoma)
- ASB for transcription factors
- PRD10_HUMAN CTCF_HUMAN SP7_HUMAN REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRD10_HUMAN | 2.31 | -3.46 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.77 | 0.29 | 1.49 | n/a | No Hit | |||
| SP7_HUMAN | 2.37 | n/a | 2.00 | n/a | n/a | |||
| REST_HUMAN | 1.96 | -2.43 | 1.50 | -2.24 | Concordant |
Items per page:
1 – 4 of 4
Motif analysis
