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rs7090365 chr10:62804668 A>C

Sequence
aatcaacaaactgaactatctcag[A/C]gctcaagcggaaggccggactaca
ASB in cell types
A549 (lung carcinoma) VCaP (prostate carcinoma)
ASB for transcription factors
ZN143_HUMAN GABPA_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN143_HUMAN 2.76 -0.63 1.1·10-30.97 2.44 n/a No Hit
GABPA_HUMAN 0.27 1.09 0.960.01 1.51 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis

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