ADASTRA v1.6.10
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rs710609
chr3:190225321
C
>
T
Sequence
tctttccaccaatagatggagcca[C/T]atgaacccaattttaaaataattt
ASB in cell types
foreskin keratinocyte
hASC (preadipocytes)
VCaP (prostate carcinoma)
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
0.64
n/a
3.1·10
-5
1.00
2.17
hASC (preadipocytes)
1.36
n/a
5.4·10
-3
1.00
1.00
VCaP (prostate carcinoma)
-0.94
1.37
1.00
0.02
2.00
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Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
hdl cholesterol
,
rheumatoid arthritis
GTEx eQTL
Brain_Putamen_basal_ganglia
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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